R !!!rstatix https://www.wenyanet.com/opensource/ja/6005734135624a73b01c238b.html https://github.com/kassambara/rstatix {{pre install.packages("rstatix") library(rstatix) }} !get_summary_stats(omega.dat2) !mshapiro_test(omega.dat2$MDD) !pairwise_wilcox_test {{pre pairwise_wilcox_test(omega.dat2, MHD~year) .y. group1 group2 n1 n2 statistic p p.adj p.adj.signif 1 MHD 2 3 699 589 144470.5 2.36e-20 4.72e-20 **** 2 MHD 2 ns 699 462 70514.5 1.28e-59 3.84e-59 **** 3 MHD 3 ns 589 462 91477.5 6.77e-20 6.77e-20 **** }} !wilcox_effsize {{pre wilcox_effsize(omega.dat2, MHD~year) .y. group1 group2 effsize n1 n2 magnitude 1 MHD 2 3 0.2575914 699 589 small 2 MHD 2 ns 0.4779203 699 462 moderate 3 MHD 3 ns 0.2816649 589 462 small }} !!ggpubr {{pre library(ggpubr) ggboxplot(omega.dat2, x = "year", y = "MHD")+ stat_pvalue_manual( pairwise.test.result, label = "p.adj", y.position = c(6, 7, 8) }} {{ref_image MHDyear.jpg}}